A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples

by Kucharski, Michal, Tripathi, Jaishree, Nayak, Sourav, Zhu, Lei, Wirjanata, Grennady, van der Pluijm, Rob W., Dhorda, Mehul, Dondorp, Arjen, Bozdech, Zbynek
Published 2021

Short tandem repeat polymorphism in the promoter region of cyclophilin 19B drives its transcriptional upregulation and contributes to drug resistance in the malaria parasite Plasmo...

by Kucharski, Michal, Wirjanata, Grennady, Nayak, Sourav, Boentoro, Josephine, Dziekan, Jerzy Michal, Assisi, Christina, van der Pluijm, Rob W., Miotto, Olivo, Mok, Sachel, Dondorp, Arjen M., Bozdech, Zbynek
Published 2023

The origins of malaria artemisinin resistance defined by a genetic and transcriptomic background

by Zhu, Lei, Tripathi, Jaishree, Rocamora, Frances Maureen, Miotto, Olivo, van der Pluijm, Rob, Voss, Till S., Mok, Sachel, Kwiatkowski, Dominic P., Nosten, François, Day, Nicholas P. J., White, Nicholas J., Dondorp, Arjen M., Bozdech, Zbynek
Published 2019

Population genomics and transcriptomics of Plasmodium falciparum in Cambodia and Vietnam uncover key components of the artemisinin resistance genetic background

by Nayak, Sourav, Peto, Thomas J., Kucharski, Michal, Tripura, Rupam, Callery, James J., Duong, Tien Quang Huy, Gendrot, Mathieu, Lek, Dysoley, Ho, Dang Trung Nghia, van der Pluijm, Rob W., Nguyen, Dong, Le, Thanh Long, Vongpromek, Ranitha, Rekol, Huy, Nguyen, Hoang Chau, Miotto, Olivo, Mukaka, Mavuto, Dhorda, Mehul, von Seidlein, Lorenz, Imwong, Mallika, Roca, Xavier, Day, Nicholas P. J., White, Nicholas J., Dondorp, Arjen M., Bozdech, Zbynek
Published 2025

Artemisinin resistance in the malaria parasite, Plasmodium falciparum, originates from its initial transcriptional response

by Zhu, Lei, van der Pluijm, Rob W., Kucharski, Michal, Nayak, Sourav, Tripathi, Jaishree, White, Nicholas J., Day, Nicholas P. J., Faiz, Abul, Phyo, Aung Pyae, Amaratunga, Chanaki, Lek, Dysoley, Ashley, Elizabeth A., Nosten, François, Smithuis, Frank, Ginsburg, Hagai, von Seidlein, Lorenz, Lin, Khin, Imwong, Mallika, Chotivanich, Kesinee, Mayxay, Mayfong, Dhorda, Mehul, Nguyen, Hoang Chau, Nguyen, Thuy Nhien Thanh, Miotto, Olivo, Newton, Paul N., Jittamala, Podjanee, Tripura, Rupam, Pukrittayakamee, Sasithon, Peto, Thomas J., Hien, Tran Tinh, Dondorp, Arjen M., Bozdech, Zbynek
Published 2022