Zika might not be acting alone: Using an ecological study approach to investigate potential co-acting risk factors for an unusual pattern of microcephaly in Brazil

بواسطة Campos M.C., Dombrowski J.G., Phelan J., Marinho C.R.F., Hibberd M., Clark T.G., Campino S.
منشور في 2019

An in-solution hybridisation method for the isolation of pathogen DNA from human DNA-rich clinical samples for analysis by NGS

بواسطة Miriam Smith, Susana Campino, Yong Gu, Taane G. Clark, Thomas D. Otto, Gareth Maslen, Magnus Manske, Mallika Imwong, Arjen M. Dondorp, Dominic P. Kwiatkowski, Michael A. Quail, Harold Swerdlow
منشور في 2018

Selective whole genome amplification of Plasmodium malariae DNA from clinical samples reveals insights into population structure

بواسطة Amy Ibrahim, Ernest Diez Benavente, Debbie Nolder, Stephane Proux, Matthew Higgins, Julian Muwanguzi, Paula Josefina Gomez Gonzalez, Hans Peter Fuehrer, Cally Roper, Francois Nosten, Colin Sutherland, Taane G. Clark, Susana Campino
منشور في 2020

Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations

بواسطة Diez Benavente E., Florez de Sessions P., Moon R.W., Holder A.A., Blackman M.J., Roper C., Drakeley C.J., Pain A., Sutherland C.J., Hibberd M.L., Campino S., Clark T.G.
منشور في 2019

A molecular barcode to inform the geographical origin and transmission dynamics of Plasmodium vivax malaria

بواسطة Ernest Diez Benavente, Monica Campos, Jody Phelan, Debbie Nolder, Jamille G. Dombrowski, Claudio R.F. Marinho, Kanlaya Sriprawat, Aimee R. Taylor, James Watson, Cally Roper, Francois Nosten, Colin J. Sutherland, Susana Campino, Taane G. Clark
منشور في 2020

Characterization of within-host plasmodium falciparum diversity using next-generation sequence data

بواسطة Sarah Auburn, Susana Campino, Olivo Miotto, Abdoulaye A. Djimde, Issaka Zongo, Magnus Manske, Gareth Maslen, Valentina Mangano, Daniel Alcock, Bronwyn MacInnis, Kirk A. Rockett, Taane G. Clark, Ogobara K. Doumbo, Jean Bosco Ouédraogo, Dominic P. Kwiatkowski
منشور في 2018

Characterization of within-host Plasmodium falciparum diversity using next-generation sequence data.

بواسطة Auburn, Sarah, Campino, Susana, Miotto, Olivo, Djimde, Abdoulaye A., Zongo, Issaka, Manske, Magnus, Maslen, Gareth, Mangano, Valentina, Alcock, Daniel, MacInnis, Bronwyn, Rockett, Kirk A., Clark, Taane G., Doumbo, Ogobara K., Ouédraogo, Jean Bosco, Kwiatkowski, Dominic P.
منشور في 2014

Methylation in Mycobacterium tuberculosis is lineage specific with associated mutations present globally

بواسطة Phelan, J, De Sessions, P.F, Tientcheu, L, Perdigao, J, Machado, D, Hasan, R, Hasan, Z, Bergval, I.L, Anthony, R, McNerney, R, Antonio, M, Portugal, I, Viveiros, M, Campino, S, Hibberd, M.L, Clark, T.G
منشور في 2020

Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance

بواسطة Phelan, J, Coll, F, McNerney, R, Ascher, D.B, Pires, D.E, Furnham, N, Coeck, N, Hill-Cawthorne, G.A, Nair, M.B, Mallard, K, Ramsay, A, Campino, S, Hibberd, M.L, Pain, A, Rigouts, L, Clark, T.G
منشور في 2020

Global genetic diversity of var2csa in Plasmodium falciparum with implications for malaria in pregnancy and vaccine development

بواسطة Benavente, E.D, Oresegun, D.R, de Sessions, P.F, Walker, E.M, Roper, C, Dombrowski, J.G, de Souza, R.M, Marinho, C.R.F, Sutherland, C.J, Hibberd, M.L, Mohareb, F, Baker, D.A, Clark, T.G, Campino, S
منشور في 2020

Distinctive genetic structure and selection patterns in Plasmodium vivax from South Asia and East Africa

بواسطة Ernest Diez Benavente, Emilia Manko, Jody Phelan, Monica Campos, Debbie Nolder, Diana Fernandez, Gabriel Velez-Tobon, Alberto Tobón Castaño, Jamille G. Dombrowski, Claudio R.F. Marinho, Anna Caroline C. Aguiar, Dhelio Batista Pereira, Kanlaya Sriprawat, Francois Nosten, Robert Moon, Colin J. Sutherland, Susana Campino, Taane G. Clark
منشور في 2022

Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics

بواسطة Sarah Auburn, Ernest D. Benavente, Olivo Miotto, Richard D. Pearson, Roberto Amato, Matthew J. Grigg, Bridget E. Barber, Timothy William, Irene Handayuni, Jutta Marfurt, Hidayat Trimarsanto, Rintis Noviyanti, Kanlaya Sriprawat, Francois Nosten, Susana Campino, Taane G. Clark, Nicholas M. Anstey, Dominic P. Kwiatkowski, Ric N. Price
منشور في 2019

Effective preparation of Plasmodium vivax field isolates for high-throughput whole genome sequencing.

بواسطة Auburn, Sarah, Marfurt, Jutta, Maslen, Gareth, Campino, Susana, Rubio, Valentin Ruano, Manske, Magnus, MacHunter, Barbara, Kenangalem, Enny, Noviyanti, Rintis, Trianty, Leily, Sebayang, Boni, Wirjanata, Grennady, Kanlaya Sriprawat, Alcock ,Daniel, MacInnis, Bronwyn, Miotto, Olivo, Clark, Taane G., Russell, Bruce, Anstey, Nicholas M., Nosten, Franc¸ois, Kwiatkowski, Dominic P.
منشور في 2014

Effective Preparation of Plasmodium vivax Field Isolates for High-Throughput Whole Genome Sequencing

بواسطة Sarah Auburn, Jutta Marfurt, Gareth Maslen, Susana Campino, Valentin Ruano Rubio, Magnus Manske, Barbara MacHunter, Enny Kenangalem, Rintis Noviyanti, Leily Trianty, Boni Sebayang, Grennady Wirjanata, Kanlaya Sriprawat, Daniel Alcock, Bronwyn MacInnis, Olivo Miotto, Taane G. Clark, Bruce Russell, Nicholas M. Anstey, François Nosten, Dominic P. Kwiatkowski, Ric N. Price
منشور في 2018

A barcode of organellar genome polymorphisms identifies the geographic origin of Plasmodium falciparum strains

بواسطة Mark D. Preston, Susana Campino, Samuel A. Assefa, Diego F. Echeverry, Harold Ocholla, Alfred Amambua-Ngwa, Lindsay B. Stewart, David J. Conway, Steffen Borrmann, Pascal Michon, Issaka Zongo, Jean Bosco Ouédraogo, Abdoulaye A. Djimde, Ogobara K. Doumbo, Francois Nosten, Arnab Pain, Teun Bousema, Chris J. Drakeley, Rick M. Fairhurst, Colin J. Sutherland, Cally Roper, Taane G. Clark
منشور في 2018

Whole-genome scans provide evidence of adaptive evolution in malawian Plasmodium falciparum isolates

بواسطة Harold Ocholla, Mark D. Preston, Mwapatsa Mipando, Anja T.R. Jensen, Susana Campino, Bronwyn Macinnis, Daniel Alcock, Anja Terlouw, Issaka Zongo, Jean Bosco Oudraogo, Abdoulaye A. Djimde, Samuel Assefa, Ogobara K. Doumbo, Steffen Borrmann, Alexis Nzila, Kevin Marsh, Rick M. Fairhurst, Francois Nosten, Tim J.C. Anderson, Dominic P. Kwiatkowski, Alister Craig, Taane G. Clark, Jacqui Montgomery
منشور في 2018

Population genetic analysis of Plasmodium falciparum parasites using a customized Illumina GoldenGate genotyping assay.

بواسطة Campino, Susana, Auburn, Sarah, Kivinen, Katja, Zongo, Issaka, Ouedraogo, Jean-Bosco, Mangano, Valentina, Djimde, Abdoulaye, Doumbo, Ogobara K., Kiara, Steven M., Nzila, Alexis, Borrmann, Steffen, Marsh, Kevin, Michon, Pascal, Mueller, Ivo, Siba, Peter, Jiang, Hongying, Su, Xin-Zhuan, Chanaki Amaratunga, Socheat, Duong, Fairhurst, Rick M., Mallika Imwong, มัลลิกา อิ่มวงศ์, Anderson, Timothy, Nosten, Francois, White, Nicholas J., Gwilliam, Rhian, Deloukas, Panos, MacInnis, Bronwyn, Newbold, Christopher I., Rockett, Kirk, Clark, Taane G., Kwiatkowski, Dominic P.
منشور في 2012

Population genetic analysis of plasmodium falciparum parasites using a customized illumina goldengate genotyping assay

بواسطة Susana Campino, Sarah Auburn, Katja Kivinen, Issaka Zongo, Jean Bosco Ouedraogo, Valentina Mangano, Abdoulaye Djimde, Ogobara K. Doumbo, Steven M. Kiara, Alexis Nzila, Steffen Borrmann, Kevin Marsh, Pascal Michon, Ivo Mueller, Peter Siba, Hongying Jiang, Xin Zhuan Su, Chanaki Amaratunga, Duong Socheat, Rick M. Fairhurst, Mallika Imwong, Timothy Anderson, François Nosten, Nicholas J. White, Rhian Gwilliam, Panos Deloukas, Bronwyn MacInnis, Christopher I. Newbold, Kirk Rockett, Taane G. Clark, Dominic P. Kwiatkowski
منشور في 2018

Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages

بواسطة Phelan, J.E, Coll, F, Bergval, I, Anthony, R.M, Warren, R, Sampson, S.L, Gey van Pittius, N.C, Glynn, J.R, Crampin, A.C, Alves, A, Bessa, T.B, Campino, S, Dheda, K, Grandjean, L, Hasan, R, Hasan, Z, Miranda, A, Moore, D, Panaiotov, S, Perdigao, J, Portugal, I, Sheen, P, de Oliveira Sousa, E, Streicher, E.M, van Helden, P.D, Viveiros, M, Hibberd, M.L, Pain, A, McNerney, R, Clark, T.G
منشور في 2020

Genomic analysis of local variation and recent evolution in Plasmodium vivax

بواسطة Richard D. Pearson, Roberto Amato, Sarah Auburn, Olivo Miotto, Jacob Almagro-Garcia, Chanaki Amaratunga, Seila Suon, Sivanna Mao, Rintis Noviyanti, Hidayat Trimarsanto, Jutta Marfurt, Nicholas M. Anstey, Timothy William, MacIej F. Boni, Christiane Dolecek, Hien Tinh Tran, Nicholas J. White, Pascal Michon, Peter Siba, Livingstone Tavul, Gabrielle Harrison, Alyssa Barry, Ivo Mueller, Marcelo U. Ferreira, Nadira Karunaweera, Milijaona Randrianarivelojosia, Qi Gao, Christina Hubbart, Lee Hart, Ben Jeffery, Eleanor Drury, Daniel Mead, Mihir Kekre, Susana Campino, Magnus Manske, Victoria J. Cornelius, Bronwyn MacInnis, Kirk A. Rockett, Alistair Miles, Julian C. Rayner, Rick M. Fairhurst, Francois Nosten, Ric N. Price, Dominic P. Kwiatkowski
منشور في 2018